Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Gm7514-201ENSMUST00000209475 934 ntBASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm29609Q3UU56 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Gm13234-201ENSMUST00000120010 747 ntBASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm29609Q3UU56 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm29609Q3UU56 Golph3-205ENSMUST00000228671 2842 ntBASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.78■□□□□ 0.76
Gm29609Q3UU56 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm29609Q3UU56 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm29609Q3UU56 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm29609Q3UU56 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Gm5408-201ENSMUST00000197998 747 ntBASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm29609Q3UU56 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm29609Q3UU56 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Gm29609Q3UU56 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms