Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam196aQ3USH1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Fam196aQ3USH1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam196aQ3USH1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam196aQ3USH1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Fam196aQ3USH1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Fam196aQ3USH1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam196aQ3USH1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Gm13559-201ENSMUST00000120476 863 ntBASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Fam196aQ3USH1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fam196aQ3USH1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fam196aQ3USH1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Fam196aQ3USH1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19■□□□□ 0.63
Fam196aQ3USH1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19■□□□□ 0.63
Fam196aQ3USH1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fam196aQ3USH1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19■□□□□ 0.63
Fam196aQ3USH1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19■□□□□ 0.63
Fam196aQ3USH1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Fam196aQ3USH1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.98■□□□□ 0.63
Fam196aQ3USH1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms