Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa3Q3UPR0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa3Q3UPR0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shisa3Q3UPR0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.27■□□□□ 0.2
Shisa3Q3UPR0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shisa3Q3UPR0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shisa3Q3UPR0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shisa3Q3UPR0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shisa3Q3UPR0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shisa3Q3UPR0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shisa3Q3UPR0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shisa3Q3UPR0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shisa3Q3UPR0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms