Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Gm5408-201ENSMUST00000197998 747 ntBASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smcr8Q3UMB5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smcr8Q3UMB5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smcr8Q3UMB5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smcr8Q3UMB5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Gm6211-202ENSMUST00000167849 925 ntBASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smcr8Q3UMB5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smcr8Q3UMB5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smcr8Q3UMB5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smcr8Q3UMB5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms