Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrra1Q3U3V8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Gm10129-202ENSMUST00000193100 1316 ntBASIC18■□□□□ 0.47
Xrra1Q3U3V8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Gm8495-201ENSMUST00000188740 694 ntBASIC18■□□□□ 0.47
Xrra1Q3U3V8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18■□□□□ 0.47
Xrra1Q3U3V8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Xrra1Q3U3V8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18■□□□□ 0.47
Xrra1Q3U3V8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gm5874-201ENSMUST00000096101 508 ntBASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xrra1Q3U3V8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Xrra1Q3U3V8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Xrra1Q3U3V8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrra1Q3U3V8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Xrra1Q3U3V8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.95■□□□□ 0.46
Xrra1Q3U3V8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrra1Q3U3V8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrra1Q3U3V8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms