Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc4Q3TCX3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc4Q3TCX3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc4Q3TCX3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Khdc4Q3TCX3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc4Q3TCX3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Khdc4Q3TCX3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.89■□□□□ 0.45
Khdc4Q3TCX3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Mir5133-201ENSMUST00000174955 77 ntBASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc4Q3TCX3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc4Q3TCX3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Khdc4Q3TCX3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Khdc4Q3TCX3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms