Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.53■□□□□ 0.88
Frat1P70339 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.53■□□□□ 0.88
Frat1P70339 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.53■□□□□ 0.88
Frat1P70339 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Frat1P70339 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Frat1P70339 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Frat1P70339 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frat1P70339 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Frat1P70339 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Frat1P70339 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.52■□□□□ 0.88
Frat1P70339 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Frat1P70339 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.52■□□□□ 0.88
Frat1P70339 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Frat1P70339 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Frat1P70339 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Frat1P70339 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Frat1P70339 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Frat1P70339 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.51■□□□□ 0.87
Frat1P70339 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Frat1P70339 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Fst-202ENSMUST00000223640 2612 ntBASIC20.51■□□□□ 0.87
Frat1P70339 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.51■□□□□ 0.87
Frat1P70339 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frat1P70339 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Frat1P70339 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Frat1P70339 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Frat1P70339 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.5■□□□□ 0.87
Frat1P70339 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Frat1P70339 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frat1P70339 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frat1P70339 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frat1P70339 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Frat1P70339 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.49■□□□□ 0.87
Frat1P70339 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.49■□□□□ 0.87
Frat1P70339 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frat1P70339 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.49■□□□□ 0.87
Frat1P70339 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Frat1P70339 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.48■□□□□ 0.87
Frat1P70339 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.48■□□□□ 0.87
Frat1P70339 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Frat1P70339 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frat1P70339 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Frat1P70339 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Frat1P70339 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Frat1P70339 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Frat1P70339 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Frat1P70339 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.47■□□□□ 0.87
Frat1P70339 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Frat1P70339 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms