Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Surf6P70279 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Surf6P70279 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.58■□□□□ 0.72
Surf6P70279 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.58■□□□□ 0.72
Surf6P70279 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Surf6P70279 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.58■□□□□ 0.72
Surf6P70279 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Surf6P70279 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Surf6P70279 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.58■□□□□ 0.72
Surf6P70279 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Surf6P70279 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Surf6P70279 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.57■□□□□ 0.72
Surf6P70279 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Surf6P70279 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Surf6P70279 AA386476-201ENSMUST00000098781 1665 ntBASIC19.57■□□□□ 0.72
Surf6P70279 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.57■□□□□ 0.72
Surf6P70279 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.57■□□□□ 0.72
Surf6P70279 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Surf6P70279 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Surf6P70279 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.56■□□□□ 0.72
Surf6P70279 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.56■□□□□ 0.72
Surf6P70279 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Surf6P70279 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Surf6P70279 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Surf6P70279 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Surf6P70279 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.55■□□□□ 0.72
Surf6P70279 Fst-202ENSMUST00000223640 2612 ntBASIC19.55■□□□□ 0.72
Surf6P70279 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Surf6P70279 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Surf6P70279 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Surf6P70279 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.54■□□□□ 0.72
Surf6P70279 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.54■□□□□ 0.72
Surf6P70279 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Surf6P70279 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Surf6P70279 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.53■□□□□ 0.72
Surf6P70279 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Surf6P70279 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Surf6P70279 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Surf6P70279 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.52■□□□□ 0.72
Surf6P70279 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Surf6P70279 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Surf6P70279 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Surf6P70279 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Surf6P70279 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Surf6P70279 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Surf6P70279 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.51■□□□□ 0.71
Surf6P70279 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms