Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.27■□□□□ 0.36
Lsm3P62311 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Gm14523-201ENSMUST00000117260 558 ntBASIC17.27■□□□□ 0.36
Lsm3P62311 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.27■□□□□ 0.36
Lsm3P62311 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm3P62311 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Lsm3P62311 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsm3P62311 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsm3P62311 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsm3P62311 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Mir6236-201ENSMUST00000184437 123 ntBASIC17.26■□□□□ 0.35
Lsm3P62311 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.26■□□□□ 0.35
Lsm3P62311 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.26■□□□□ 0.35
Lsm3P62311 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm3P62311 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.25■□□□□ 0.35
Lsm3P62311 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.25■□□□□ 0.35
Lsm3P62311 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.25■□□□□ 0.35
Lsm3P62311 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm3P62311 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Lsm3P62311 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Fst-202ENSMUST00000223640 2612 ntBASIC17.24■□□□□ 0.35
Lsm3P62311 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsm3P62311 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lsm3P62311 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lsm3P62311 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.24■□□□□ 0.35
Lsm3P62311 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm3P62311 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lsm3P62311 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lsm3P62311 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.23■□□□□ 0.35
Lsm3P62311 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.23■□□□□ 0.35
Lsm3P62311 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.23■□□□□ 0.35
Lsm3P62311 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm3P62311 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm3P62311 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lsm3P62311 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.22■□□□□ 0.35
Lsm3P62311 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.22■□□□□ 0.35
Lsm3P62311 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm3P62311 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm3P62311 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.21■□□□□ 0.35
Lsm3P62311 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lsm3P62311 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm3P62311 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm3P62311 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Lsm3P62311 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm3P62311 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm3P62311 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm3P62311 Gm7332-201ENSMUST00000118351 454 ntBASIC17.21■□□□□ 0.35
Lsm3P62311 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms