Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp20P57748 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Mmp20P57748 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp20P57748 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp20P57748 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp20P57748 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Mmp20P57748 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Mmp20P57748 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.75■■□□□ 1.07
Mmp20P57748 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Gm13836-201ENSMUST00000121159 501 ntBASIC21.75■■□□□ 1.07
Mmp20P57748 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.75■■□□□ 1.07
Mmp20P57748 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.75■■□□□ 1.07
Mmp20P57748 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp20P57748 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.75■■□□□ 1.07
Mmp20P57748 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.74■■□□□ 1.07
Mmp20P57748 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.74■■□□□ 1.07
Mmp20P57748 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mmp20P57748 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.74■■□□□ 1.07
Mmp20P57748 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp20P57748 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Mmp20P57748 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.73■■□□□ 1.07
Mmp20P57748 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Mmp20P57748 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Mmp20P57748 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Mmp20P57748 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp20P57748 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Mmp20P57748 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp20P57748 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Mmp20P57748 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Mmp20P57748 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.71■■□□□ 1.07
Mmp20P57748 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Mmp20P57748 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Mmp20P57748 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp20P57748 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Mmp20P57748 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.7■■□□□ 1.06
Mmp20P57748 Gm15378-201ENSMUST00000121894 207 ntBASIC21.7■■□□□ 1.06
Mmp20P57748 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.7■■□□□ 1.06
Mmp20P57748 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Mmp20P57748 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mmp20P57748 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.69■■□□□ 1.06
Mmp20P57748 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.69■■□□□ 1.06
Mmp20P57748 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp20P57748 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Mmp20P57748 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.68■■□□□ 1.06
Mmp20P57748 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Mmp20P57748 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Mmp20P57748 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mmp20P57748 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp20P57748 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp20P57748 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Mmp20P57748 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mmp20P57748 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.67■■□□□ 1.06
Mmp20P57748 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms