Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.69■□□□□ 0.58
Pdx1P52946 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.68■□□□□ 0.58
Pdx1P52946 Gm8495-201ENSMUST00000188740 694 ntBASIC18.68■□□□□ 0.58
Pdx1P52946 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pdx1P52946 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdx1P52946 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pdx1P52946 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pdx1P52946 Gm26571-201ENSMUST00000181399 666 ntBASIC18.67■□□□□ 0.58
Pdx1P52946 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Pdx1P52946 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pdx1P52946 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdx1P52946 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pdx1P52946 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.66■□□□□ 0.58
Pdx1P52946 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pdx1P52946 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdx1P52946 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.65■□□□□ 0.58
Pdx1P52946 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Gm18671-201ENSMUST00000214826 683 ntBASIC18.65■□□□□ 0.58
Pdx1P52946 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pdx1P52946 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.65■□□□□ 0.58
Pdx1P52946 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pdx1P52946 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdx1P52946 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Pdx1P52946 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdx1P52946 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdx1P52946 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.64■□□□□ 0.58
Pdx1P52946 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdx1P52946 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdx1P52946 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pdx1P52946 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.64■□□□□ 0.57
Pdx1P52946 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdx1P52946 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pdx1P52946 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdx1P52946 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdx1P52946 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdx1P52946 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.63■□□□□ 0.57
Pdx1P52946 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdx1P52946 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pdx1P52946 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.62■□□□□ 0.57
Pdx1P52946 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Pdx1P52946 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.62■□□□□ 0.57
Pdx1P52946 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.62■□□□□ 0.57
Pdx1P52946 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.62■□□□□ 0.57
Pdx1P52946 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.62■□□□□ 0.57
Pdx1P52946 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdx1P52946 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdx1P52946 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdx1P52946 AV356131-201ENSMUST00000206201 750 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms