Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.99■□□□□ 0.47
CcnfP51944 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CcnfP51944 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcnfP51944 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.98■□□□□ 0.47
CcnfP51944 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CcnfP51944 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CcnfP51944 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcnfP51944 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CcnfP51944 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.97■□□□□ 0.47
CcnfP51944 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.97■□□□□ 0.47
CcnfP51944 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CcnfP51944 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.96■□□□□ 0.47
CcnfP51944 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.96■□□□□ 0.47
CcnfP51944 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CcnfP51944 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CcnfP51944 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CcnfP51944 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CcnfP51944 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CcnfP51944 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CcnfP51944 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
CcnfP51944 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CcnfP51944 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CcnfP51944 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.94■□□□□ 0.46
CcnfP51944 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CcnfP51944 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CcnfP51944 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.93■□□□□ 0.46
CcnfP51944 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Gm22238-201ENSMUST00000175222 88 ntBASIC17.93■□□□□ 0.46
CcnfP51944 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CcnfP51944 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CcnfP51944 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CcnfP51944 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CcnfP51944 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CcnfP51944 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CcnfP51944 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms