Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr1P51675 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccr1P51675 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Ccr1P51675 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Ccr1P51675 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccr1P51675 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccr1P51675 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ccr1P51675 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccr1P51675 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccr1P51675 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.61■□□□□ 0.89
Ccr1P51675 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ccr1P51675 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.61■□□□□ 0.89
Ccr1P51675 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Ccr1P51675 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccr1P51675 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccr1P51675 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccr1P51675 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Gm20049-201ENSMUST00000219950 730 ntBASIC20.6■□□□□ 0.89
Ccr1P51675 Rab3c-203ENSMUST00000224180 967 ntBASIC20.6■□□□□ 0.89
Ccr1P51675 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccr1P51675 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccr1P51675 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.59■□□□□ 0.89
Ccr1P51675 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccr1P51675 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccr1P51675 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr1P51675 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccr1P51675 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ccr1P51675 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr1P51675 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr1P51675 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ccr1P51675 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr1P51675 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr1P51675 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.58■□□□□ 0.89
Ccr1P51675 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.58■□□□□ 0.89
Ccr1P51675 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccr1P51675 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccr1P51675 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccr1P51675 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ccr1P51675 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccr1P51675 Gm20760-201ENSMUST00000179197 648 ntBASIC20.57■□□□□ 0.88
Ccr1P51675 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccr1P51675 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccr1P51675 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccr1P51675 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccr1P51675 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ccr1P51675 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ccr1P51675 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccr1P51675 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccr1P51675 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccr1P51675 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccr1P51675 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccr1P51675 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr1P51675 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccr1P51675 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccr1P51675 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.55■□□□□ 0.88
Ccr1P51675 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr1P51675 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccr1P51675 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccr1P51675 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccr1P51675 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms