Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SftpbP50405 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SftpbP50405 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.29■□□□□ 0.68
SftpbP50405 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.29■□□□□ 0.68
SftpbP50405 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SftpbP50405 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SftpbP50405 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.28■□□□□ 0.68
SftpbP50405 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.28■□□□□ 0.68
SftpbP50405 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.28■□□□□ 0.68
SftpbP50405 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SftpbP50405 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.27■□□□□ 0.68
SftpbP50405 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SftpbP50405 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
SftpbP50405 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Gm12251-201ENSMUST00000117893 792 ntBASIC19.26■□□□□ 0.67
SftpbP50405 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.26■□□□□ 0.67
SftpbP50405 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.26■□□□□ 0.67
SftpbP50405 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SftpbP50405 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SftpbP50405 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SftpbP50405 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.25■□□□□ 0.67
SftpbP50405 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SftpbP50405 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SftpbP50405 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SftpbP50405 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SftpbP50405 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SftpbP50405 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SftpbP50405 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SftpbP50405 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.24■□□□□ 0.67
SftpbP50405 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.23■□□□□ 0.67
SftpbP50405 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.23■□□□□ 0.67
SftpbP50405 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.23■□□□□ 0.67
SftpbP50405 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.23■□□□□ 0.67
SftpbP50405 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SftpbP50405 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SftpbP50405 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SftpbP50405 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SftpbP50405 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SftpbP50405 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SftpbP50405 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms