Protein–RNA interactions for Protein: P48787

Tnni3, Troponin I, cardiac muscle, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnni3P48787 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Tnni3P48787 Gm7290-201ENSMUST00000104990 617 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Gm12918-201ENSMUST00000120234 636 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Gm15710-201ENSMUST00000121821 636 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnni3P48787 Gm5075-201ENSMUST00000196916 622 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.7■□□□□ 0.9
Tnni3P48787 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnni3P48787 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnni3P48787 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnni3P48787 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnni3P48787 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnni3P48787 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnni3P48787 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnni3P48787 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.68■□□□□ 0.9
Tnni3P48787 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.68■□□□□ 0.9
Tnni3P48787 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.68■□□□□ 0.9
Tnni3P48787 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.68■□□□□ 0.9
Tnni3P48787 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Tnni3P48787 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnni3P48787 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Tnni3P48787 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.67■□□□□ 0.9
Tnni3P48787 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.67■□□□□ 0.9
Tnni3P48787 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tnni3P48787 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnni3P48787 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tnni3P48787 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnni3P48787 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnni3P48787 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnni3P48787 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnni3P48787 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.66■□□□□ 0.9
Tnni3P48787 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnni3P48787 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.66■□□□□ 0.9
Tnni3P48787 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tnni3P48787 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.66■□□□□ 0.9
Tnni3P48787 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnni3P48787 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tnni3P48787 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Tnni3P48787 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.65■□□□□ 0.9
Tnni3P48787 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.65■□□□□ 0.9
Tnni3P48787 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnni3P48787 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnni3P48787 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnni3P48787 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnni3P48787 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnni3P48787 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnni3P48787 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.64■□□□□ 0.89
Tnni3P48787 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnni3P48787 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnni3P48787 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tnni3P48787 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Tnni3P48787 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnni3P48787 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnni3P48787 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnni3P48787 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.63■□□□□ 0.89
Tnni3P48787 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnni3P48787 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.63■□□□□ 0.89
Tnni3P48787 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnni3P48787 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnni3P48787 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.63■□□□□ 0.89
Tnni3P48787 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnni3P48787 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnni3P48787 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnni3P48787 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnni3P48787 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms