Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.14■□□□□ 0.49
Rph3aP47708 Gm10493-201ENSMUST00000097270 612 ntBASIC18.14■□□□□ 0.49
Rph3aP47708 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
Rph3aP47708 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rph3aP47708 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rph3aP47708 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.13■□□□□ 0.49
Rph3aP47708 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.13■□□□□ 0.49
Rph3aP47708 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Gm9988-201ENSMUST00000069786 435 ntBASIC18.13■□□□□ 0.49
Rph3aP47708 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rph3aP47708 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.13■□□□□ 0.49
Rph3aP47708 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rph3aP47708 Golph3-205ENSMUST00000228671 2842 ntBASIC18.12■□□□□ 0.49
Rph3aP47708 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.12■□□□□ 0.49
Rph3aP47708 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.12■□□□□ 0.49
Rph3aP47708 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.12■□□□□ 0.49
Rph3aP47708 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rph3aP47708 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.12■□□□□ 0.49
Rph3aP47708 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rph3aP47708 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.11■□□□□ 0.49
Rph3aP47708 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Rph3aP47708 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.11■□□□□ 0.49
Rph3aP47708 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.11■□□□□ 0.49
Rph3aP47708 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.11■□□□□ 0.49
Rph3aP47708 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rph3aP47708 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.1■□□□□ 0.49
Rph3aP47708 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rph3aP47708 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.1■□□□□ 0.49
Rph3aP47708 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.1■□□□□ 0.49
Rph3aP47708 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rph3aP47708 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rph3aP47708 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.1■□□□□ 0.49
Rph3aP47708 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.1■□□□□ 0.49
Rph3aP47708 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rph3aP47708 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rph3aP47708 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Rph3aP47708 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rph3aP47708 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.09■□□□□ 0.49
Rph3aP47708 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.09■□□□□ 0.49
Rph3aP47708 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.09■□□□□ 0.49
Rph3aP47708 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rph3aP47708 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rph3aP47708 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rph3aP47708 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rph3aP47708 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rph3aP47708 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.49
Rph3aP47708 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rph3aP47708 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms