Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox6P40645 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox6P40645 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox6P40645 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox6P40645 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox6P40645 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox6P40645 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sox6P40645 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Spcs1-204ENSMUST00000226782 949 ntBASIC17.66■□□□□ 0.42
Sox6P40645 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
Sox6P40645 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Sox6P40645 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox6P40645 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.65■□□□□ 0.42
Sox6P40645 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sox6P40645 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Sox6P40645 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.65■□□□□ 0.42
Sox6P40645 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sox6P40645 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox6P40645 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Sox6P40645 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox6P40645 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.64■□□□□ 0.41
Sox6P40645 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
Sox6P40645 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sox6P40645 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.41
Sox6P40645 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox6P40645 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sox6P40645 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.63■□□□□ 0.41
Sox6P40645 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox6P40645 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Gm8493-201ENSMUST00000196881 489 ntBASIC17.63■□□□□ 0.41
Sox6P40645 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox6P40645 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.62■□□□□ 0.41
Sox6P40645 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sox6P40645 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.62■□□□□ 0.41
Sox6P40645 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.62■□□□□ 0.41
Sox6P40645 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sox6P40645 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox6P40645 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox6P40645 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox6P40645 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox6P40645 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms