Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.36■□□□□ 0.85
Aldh1a1P24549 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Aldh1a1P24549 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.36■□□□□ 0.85
Aldh1a1P24549 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aldh1a1P24549 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Aldh1a1P24549 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aldh1a1P24549 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.35■□□□□ 0.85
Aldh1a1P24549 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Aldh1a1P24549 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.34■□□□□ 0.85
Aldh1a1P24549 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aldh1a1P24549 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aldh1a1P24549 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.33■□□□□ 0.84
Aldh1a1P24549 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.32■□□□□ 0.84
Aldh1a1P24549 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Aldh1a1P24549 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Aldh1a1P24549 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Aldh1a1P24549 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Aldh1a1P24549 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Gm9987-201ENSMUST00000069768 567 ntBASIC20.3■□□□□ 0.84
Aldh1a1P24549 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aldh1a1P24549 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.3■□□□□ 0.84
Aldh1a1P24549 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Aldh1a1P24549 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Aldh1a1P24549 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Aldh1a1P24549 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.28■□□□□ 0.84
Aldh1a1P24549 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Aldh1a1P24549 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.28■□□□□ 0.84
Aldh1a1P24549 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms