Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Irf8P23611 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.43■□□□□ 0.86
Irf8P23611 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Irf8P23611 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf8P23611 BC021767-201ENSMUST00000126387 1716 ntBASIC20.43■□□□□ 0.86
Irf8P23611 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf8P23611 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.43■□□□□ 0.86
Irf8P23611 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Irf8P23611 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.43■□□□□ 0.86
Irf8P23611 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Irf8P23611 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Irf8P23611 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.42■□□□□ 0.86
Irf8P23611 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Irf8P23611 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf8P23611 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Irf8P23611 Gm26571-201ENSMUST00000181399 666 ntBASIC20.41■□□□□ 0.86
Irf8P23611 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.41■□□□□ 0.86
Irf8P23611 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf8P23611 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf8P23611 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.41■□□□□ 0.86
Irf8P23611 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf8P23611 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf8P23611 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf8P23611 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Irf8P23611 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Irf8P23611 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.4■□□□□ 0.86
Irf8P23611 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf8P23611 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Irf8P23611 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf8P23611 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf8P23611 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf8P23611 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Irf8P23611 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Irf8P23611 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.39■□□□□ 0.85
Irf8P23611 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Gm7514-201ENSMUST00000209475 934 ntBASIC20.39■□□□□ 0.85
Irf8P23611 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Irf8P23611 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Irf8P23611 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Irf8P23611 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf8P23611 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf8P23611 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Irf8P23611 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Irf8P23611 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Irf8P23611 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Irf8P23611 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Irf8P23611 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.38■□□□□ 0.85
Irf8P23611 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.38■□□□□ 0.85
Irf8P23611 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf8P23611 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Irf8P23611 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf8P23611 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.37■□□□□ 0.85
Irf8P23611 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Irf8P23611 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Irf8P23611 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Irf8P23611 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Irf8P23611 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Irf8P23611 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Irf8P23611 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms