Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.44■□□□□ 0.7
Hmga1P17095 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmga1P17095 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hmga1P17095 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hmga1P17095 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.43■□□□□ 0.7
Hmga1P17095 Rab3c-203ENSMUST00000224180 967 ntBASIC19.43■□□□□ 0.7
Hmga1P17095 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmga1P17095 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.42■□□□□ 0.7
Hmga1P17095 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hmga1P17095 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hmga1P17095 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.42■□□□□ 0.7
Hmga1P17095 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmga1P17095 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmga1P17095 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Hmga1P17095 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Hmga1P17095 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.41■□□□□ 0.7
Hmga1P17095 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.41■□□□□ 0.7
Hmga1P17095 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Golph3-202ENSMUST00000226517 2359 ntBASIC19.41■□□□□ 0.7
Hmga1P17095 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.41■□□□□ 0.7
Hmga1P17095 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmga1P17095 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Hmga1P17095 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.4■□□□□ 0.7
Hmga1P17095 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.4■□□□□ 0.7
Hmga1P17095 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Hmga1P17095 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmga1P17095 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.4■□□□□ 0.7
Hmga1P17095 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmga1P17095 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmga1P17095 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmga1P17095 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmga1P17095 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hmga1P17095 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Hmga1P17095 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmga1P17095 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hmga1P17095 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.39■□□□□ 0.69
Hmga1P17095 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmga1P17095 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmga1P17095 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmga1P17095 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmga1P17095 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmga1P17095 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hmga1P17095 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hmga1P17095 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmga1P17095 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hmga1P17095 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmga1P17095 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmga1P17095 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hmga1P17095 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hmga1P17095 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.37■□□□□ 0.69
Hmga1P17095 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hmga1P17095 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.37■□□□□ 0.69
Hmga1P17095 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hmga1P17095 Gm20760-201ENSMUST00000179197 648 ntBASIC19.37■□□□□ 0.69
Hmga1P17095 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.37■□□□□ 0.69
Hmga1P17095 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.37■□□□□ 0.69
Hmga1P17095 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hmga1P17095 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hmga1P17095 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hmga1P17095 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Hmga1P17095 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms