Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc8P09025 Gm2399-201ENSMUST00000104944 225 ntBASIC20.34■□□□□ 0.85
Hoxc8P09025 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.34■□□□□ 0.85
Hoxc8P09025 Gm10698-201ENSMUST00000182663 604 ntBASIC20.34■□□□□ 0.85
Hoxc8P09025 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc8P09025 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hoxc8P09025 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Hoxc8P09025 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc8P09025 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc8P09025 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc8P09025 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc8P09025 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc8P09025 Gm18666-201ENSMUST00000190039 958 ntBASIC20.33■□□□□ 0.85
Hoxc8P09025 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.33■□□□□ 0.85
Hoxc8P09025 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.33■□□□□ 0.85
Hoxc8P09025 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.33■□□□□ 0.85
Hoxc8P09025 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc8P09025 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.33■□□□□ 0.85
Hoxc8P09025 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc8P09025 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.33■□□□□ 0.84
Hoxc8P09025 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc8P09025 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hoxc8P09025 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hoxc8P09025 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hoxc8P09025 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.32■□□□□ 0.84
Hoxc8P09025 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc8P09025 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hoxc8P09025 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc8P09025 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc8P09025 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hoxc8P09025 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc8P09025 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc8P09025 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.3■□□□□ 0.84
Hoxc8P09025 Mir6982-201ENSMUST00000184354 68 ntBASIC20.3■□□□□ 0.84
Hoxc8P09025 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc8P09025 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc8P09025 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hoxc8P09025 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Hoxc8P09025 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc8P09025 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc8P09025 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.28■□□□□ 0.84
Hoxc8P09025 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxc8P09025 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc8P09025 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.28■□□□□ 0.84
Hoxc8P09025 Gm6576-201ENSMUST00000169678 883 ntBASIC20.28■□□□□ 0.84
Hoxc8P09025 Mir7071-201ENSMUST00000184847 69 ntBASIC20.28■□□□□ 0.84
Hoxc8P09025 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.28■□□□□ 0.84
Hoxc8P09025 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc8P09025 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc8P09025 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hoxc8P09025 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hoxc8P09025 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.27■□□□□ 0.84
Hoxc8P09025 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.27■□□□□ 0.84
Hoxc8P09025 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.27■□□□□ 0.84
Hoxc8P09025 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.27■□□□□ 0.84
Hoxc8P09025 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc8P09025 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Hoxc8P09025 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hoxc8P09025 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms