Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.65■□□□□ 0.58
Hoxa4P06798 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa4P06798 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa4P06798 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxa4P06798 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxa4P06798 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxa4P06798 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxa4P06798 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.64■□□□□ 0.57
Hoxa4P06798 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hoxa4P06798 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hoxa4P06798 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.64■□□□□ 0.57
Hoxa4P06798 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa4P06798 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa4P06798 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa4P06798 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa4P06798 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa4P06798 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.63■□□□□ 0.57
Hoxa4P06798 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.63■□□□□ 0.57
Hoxa4P06798 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.63■□□□□ 0.57
Hoxa4P06798 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxa4P06798 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hoxa4P06798 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa4P06798 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa4P06798 Nespas-201ENSMUST00000143738 1083 ntBASIC18.62■□□□□ 0.57
Hoxa4P06798 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxa4P06798 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.62■□□□□ 0.57
Hoxa4P06798 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Hoxa4P06798 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa4P06798 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxa4P06798 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.61■□□□□ 0.57
Hoxa4P06798 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.61■□□□□ 0.57
Hoxa4P06798 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Hoxa4P06798 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxa4P06798 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hoxa4P06798 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.6■□□□□ 0.57
Hoxa4P06798 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.6■□□□□ 0.57
Hoxa4P06798 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Hoxa4P06798 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Hoxa4P06798 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxa4P06798 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hoxa4P06798 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hoxa4P06798 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Hoxa4P06798 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxa4P06798 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxa4P06798 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxa4P06798 Gm6365-201ENSMUST00000054711 744 ntBASIC18.58■□□□□ 0.56
Hoxa4P06798 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hoxa4P06798 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hoxa4P06798 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Hoxa4P06798 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.57■□□□□ 0.56
Hoxa4P06798 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hoxa4P06798 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Hoxa4P06798 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa4P06798 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa4P06798 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa4P06798 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa4P06798 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hoxa4P06798 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms