Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.83■□□□□ 0.28
P06344 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P06344 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P06344 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P06344 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P06344 Gm13534-201ENSMUST00000121169 513 ntBASIC16.82■□□□□ 0.28
P06344 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
P06344 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P06344 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P06344 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.81■□□□□ 0.28
P06344 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P06344 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.81■□□□□ 0.28
P06344 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P06344 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P06344 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.81■□□□□ 0.28
P06344 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
P06344 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.81■□□□□ 0.28
P06344 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
P06344 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P06344 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P06344 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
P06344 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
P06344 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P06344 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
P06344 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P06344 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P06344 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P06344 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.79■□□□□ 0.28
P06344 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.79■□□□□ 0.28
P06344 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.79■□□□□ 0.28
P06344 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P06344 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
P06344 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P06344 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.79■□□□□ 0.28
P06344 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P06344 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.78■□□□□ 0.28
P06344 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06344 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
P06344 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
P06344 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
P06344 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
P06344 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
P06344 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
P06344 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
P06344 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Gm12933-201ENSMUST00000120203 872 ntBASIC16.77■□□□□ 0.28
P06344 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
P06344 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.77■□□□□ 0.28
P06344 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.77■□□□□ 0.28
P06344 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.77■□□□□ 0.28
P06344 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
P06344 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06344 Golph3-205ENSMUST00000228671 2842 ntBASIC16.77■□□□□ 0.27
P06344 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
P06344 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.77■□□□□ 0.27
P06344 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P06344 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.76■□□□□ 0.27
P06344 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
P06344 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.76■□□□□ 0.27
P06344 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
P06344 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06344 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms