Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd74P04441 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd74P04441 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd74P04441 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd74P04441 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.8■□□□□ 0.12
Cd74P04441 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.8■□□□□ 0.12
Cd74P04441 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cd74P04441 Gm42778-201ENSMUST00000199644 553 ntBASIC15.8■□□□□ 0.12
Cd74P04441 Gm42569-201ENSMUST00000200539 472 ntBASIC15.8■□□□□ 0.12
Cd74P04441 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.8■□□□□ 0.12
Cd74P04441 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.8■□□□□ 0.12
Cd74P04441 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cd74P04441 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Cd74P04441 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd74P04441 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.79■□□□□ 0.12
Cd74P04441 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.79■□□□□ 0.12
Cd74P04441 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.79■□□□□ 0.12
Cd74P04441 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.79■□□□□ 0.12
Cd74P04441 Gm18671-201ENSMUST00000214826 683 ntBASIC15.79■□□□□ 0.12
Cd74P04441 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cd74P04441 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cd74P04441 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd74P04441 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Cd74P04441 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.78■□□□□ 0.12
Cd74P04441 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.78■□□□□ 0.12
Cd74P04441 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.78■□□□□ 0.12
Cd74P04441 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd74P04441 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.77■□□□□ 0.12
Cd74P04441 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Cd74P04441 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Cd74P04441 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.77■□□□□ 0.12
Cd74P04441 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cd74P04441 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.77■□□□□ 0.11
Cd74P04441 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Cd74P04441 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cd74P04441 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cd74P04441 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cd74P04441 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cd74P04441 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cd74P04441 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Gm7291-201ENSMUST00000199147 382 ntBASIC15.76■□□□□ 0.11
Cd74P04441 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cd74P04441 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Cd74P04441 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.76■□□□□ 0.11
Cd74P04441 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.75■□□□□ 0.11
Cd74P04441 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cd74P04441 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms