Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.55■□□□□ 0.24
P04224 Gm40881-201ENSMUST00000223397 166 ntBASIC16.55■□□□□ 0.24
P04224 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04224 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
P04224 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04224 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.55■□□□□ 0.24
P04224 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.55■□□□□ 0.24
P04224 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04224 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04224 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04224 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.54■□□□□ 0.24
P04224 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.54■□□□□ 0.24
P04224 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
P04224 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.54■□□□□ 0.24
P04224 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04224 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
P04224 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
P04224 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.53■□□□□ 0.24
P04224 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
P04224 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
P04224 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.53■□□□□ 0.24
P04224 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04224 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
P04224 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
P04224 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04224 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04224 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04224 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
P04224 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04224 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P04224 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04224 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P04224 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
P04224 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
P04224 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04224 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04224 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04224 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04224 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04224 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
P04224 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04224 Mir6236-201ENSMUST00000184437 123 ntBASIC16.49■□□□□ 0.23
P04224 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms