Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Col4a1P02463 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col4a1P02463 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col4a1P02463 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
Col4a1P02463 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Col4a1P02463 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.54■■□□□ 1.36
Col4a1P02463 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col4a1P02463 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.53■■□□□ 1.36
Col4a1P02463 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.53■■□□□ 1.36
Col4a1P02463 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Col4a1P02463 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.53■■□□□ 1.36
Col4a1P02463 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col4a1P02463 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Col4a1P02463 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC23.52■■□□□ 1.36
Col4a1P02463 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Col4a1P02463 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col4a1P02463 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col4a1P02463 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col4a1P02463 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col4a1P02463 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col4a1P02463 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
Col4a1P02463 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col4a1P02463 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC23.51■■□□□ 1.35
Col4a1P02463 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.51■■□□□ 1.35
Col4a1P02463 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Col4a1P02463 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col4a1P02463 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.5■■□□□ 1.35
Col4a1P02463 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.5■■□□□ 1.35
Col4a1P02463 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.5■■□□□ 1.35
Col4a1P02463 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col4a1P02463 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.49■■□□□ 1.35
Col4a1P02463 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Col4a1P02463 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.49■■□□□ 1.35
Col4a1P02463 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.49■■□□□ 1.35
Col4a1P02463 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col4a1P02463 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Col4a1P02463 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Col4a1P02463 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.49■■□□□ 1.35
Col4a1P02463 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Gm715-201ENSMUST00000117865 831 ntBASIC23.48■■□□□ 1.35
Col4a1P02463 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Col4a1P02463 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Col4a1P02463 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col4a1P02463 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.48■■□□□ 1.35
Col4a1P02463 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.48■■□□□ 1.35
Col4a1P02463 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Col4a1P02463 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col4a1P02463 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col4a1P02463 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col4a1P02463 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col4a1P02463 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.47■■□□□ 1.35
Col4a1P02463 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col4a1P02463 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col4a1P02463 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col4a1P02463 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col4a1P02463 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col4a1P02463 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col4a1P02463 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Col4a1P02463 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms