Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.12■□□□□ 0.17
P01798 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P01798 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
P01798 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
P01798 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.12■□□□□ 0.17
P01798 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01798 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01798 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.11■□□□□ 0.17
P01798 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
P01798 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.11■□□□□ 0.17
P01798 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.11■□□□□ 0.17
P01798 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.11■□□□□ 0.17
P01798 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.11■□□□□ 0.17
P01798 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
P01798 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
P01798 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
P01798 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01798 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.1■□□□□ 0.17
P01798 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.1■□□□□ 0.17
P01798 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.1■□□□□ 0.17
P01798 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01798 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
P01798 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.09■□□□□ 0.17
P01798 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.09■□□□□ 0.17
P01798 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.09■□□□□ 0.17
P01798 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.09■□□□□ 0.17
P01798 Gm40848-201ENSMUST00000221998 324 ntBASIC16.09■□□□□ 0.17
P01798 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.09■□□□□ 0.17
P01798 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
P01798 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
P01798 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01798 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01798 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01798 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P01798 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
P01798 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
P01798 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P01798 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Gm11421-201ENSMUST00000122124 294 ntBASIC16.08■□□□□ 0.16
P01798 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.08■□□□□ 0.16
P01798 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P01798 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.08■□□□□ 0.16
P01798 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P01798 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.08■□□□□ 0.16
P01798 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01798 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P01798 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
P01798 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.07■□□□□ 0.16
P01798 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
P01798 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.07■□□□□ 0.16
P01798 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01798 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01798 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01798 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P01798 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
P01798 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01798 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P01798 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01798 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
P01798 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms