Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Gm8520-201ENSMUST00000186517 868 ntBASIC20.72■□□□□ 0.91
Mtco1P00397 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.72■□□□□ 0.91
Mtco1P00397 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.72■□□□□ 0.91
Mtco1P00397 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Mtco1P00397 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.71■□□□□ 0.91
Mtco1P00397 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Mtco1P00397 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mtco1P00397 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Mtco1P00397 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Mtco1P00397 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mtco1P00397 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mtco1P00397 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mtco1P00397 Trmt13-210ENSMUST00000198454 880 ntBASIC20.7■□□□□ 0.9
Mtco1P00397 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.7■□□□□ 0.9
Mtco1P00397 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mtco1P00397 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.7■□□□□ 0.9
Mtco1P00397 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mtco1P00397 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Mtco1P00397 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.69■□□□□ 0.9
Mtco1P00397 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Mtco1P00397 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mtco1P00397 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.69■□□□□ 0.9
Mtco1P00397 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mtco1P00397 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mtco1P00397 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mtco1P00397 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.68■□□□□ 0.9
Mtco1P00397 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mtco1P00397 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mtco1P00397 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mtco1P00397 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.67■□□□□ 0.9
Mtco1P00397 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.67■□□□□ 0.9
Mtco1P00397 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Mtco1P00397 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mtco1P00397 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mtco1P00397 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mtco1P00397 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Mtco1P00397 Gm27275-201ENSMUST00000184318 272 ntBASIC20.66■□□□□ 0.9
Mtco1P00397 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mtco1P00397 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mtco1P00397 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mtco1P00397 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mtco1P00397 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.65■□□□□ 0.9
Mtco1P00397 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.65■□□□□ 0.9
Mtco1P00397 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.65■□□□□ 0.9
Mtco1P00397 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mtco1P00397 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mtco1P00397 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mtco1P00397 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mtco1P00397 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Mtco1P00397 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Mtco1P00397 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mtco1P00397 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mtco1P00397 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mtco1P00397 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.63■□□□□ 0.89
Mtco1P00397 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.63■□□□□ 0.89
Mtco1P00397 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Mtco1P00397 Gm12896-201ENSMUST00000118430 226 ntBASIC20.63■□□□□ 0.89
Mtco1P00397 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.63■□□□□ 0.89
Mtco1P00397 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtco1P00397 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Mtco1P00397 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mtco1P00397 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.63■□□□□ 0.89
Mtco1P00397 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Mtco1P00397 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms