Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sh2d1aO88890 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Gm8493-201ENSMUST00000196881 489 ntBASIC13.32□□□□□ -0.28
Sh2d1aO88890 Gm45417-201ENSMUST00000209533 758 ntBASIC13.32□□□□□ -0.28
Sh2d1aO88890 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sh2d1aO88890 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.31□□□□□ -0.28
Sh2d1aO88890 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh2d1aO88890 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.31□□□□□ -0.28
Sh2d1aO88890 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1aO88890 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh2d1aO88890 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.29□□□□□ -0.28
Sh2d1aO88890 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh2d1aO88890 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.28□□□□□ -0.28
Sh2d1aO88890 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.28□□□□□ -0.28
Sh2d1aO88890 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms