Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.33■□□□□ 0.68
ShdO88834 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ShdO88834 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ShdO88834 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.33■□□□□ 0.68
ShdO88834 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShdO88834 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShdO88834 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShdO88834 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShdO88834 Gm9988-201ENSMUST00000069786 435 ntBASIC19.32■□□□□ 0.68
ShdO88834 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShdO88834 Reep4-203ENSMUST00000226563 1444 ntBASIC19.32■□□□□ 0.68
ShdO88834 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ShdO88834 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ShdO88834 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.31■□□□□ 0.68
ShdO88834 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ShdO88834 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ShdO88834 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ShdO88834 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ShdO88834 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ShdO88834 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShdO88834 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.3■□□□□ 0.68
ShdO88834 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ShdO88834 Gm8495-201ENSMUST00000188740 694 ntBASIC19.3■□□□□ 0.68
ShdO88834 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ShdO88834 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.3■□□□□ 0.68
ShdO88834 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShdO88834 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.29■□□□□ 0.68
ShdO88834 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShdO88834 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ShdO88834 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.28■□□□□ 0.68
ShdO88834 BC021767-201ENSMUST00000126387 1716 ntBASIC19.28■□□□□ 0.68
ShdO88834 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.28■□□□□ 0.68
ShdO88834 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ShdO88834 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ShdO88834 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.28■□□□□ 0.68
ShdO88834 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ShdO88834 Gm5874-201ENSMUST00000096101 508 ntBASIC19.28■□□□□ 0.68
ShdO88834 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShdO88834 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.28■□□□□ 0.68
ShdO88834 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.27■□□□□ 0.68
ShdO88834 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.27■□□□□ 0.68
ShdO88834 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.27■□□□□ 0.68
ShdO88834 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.27■□□□□ 0.68
ShdO88834 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShdO88834 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ShdO88834 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.67
ShdO88834 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ShdO88834 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ShdO88834 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShdO88834 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms