Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcn1O88704 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcn1O88704 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcn1O88704 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcn1O88704 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.01■□□□□ 0.47
Hcn1O88704 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcn1O88704 Gm6802-201ENSMUST00000167843 1983 ntBASIC18■□□□□ 0.47
Hcn1O88704 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Gm10571-201ENSMUST00000097869 1638 ntBASIC18■□□□□ 0.47
Hcn1O88704 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18■□□□□ 0.47
Hcn1O88704 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcn1O88704 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hcn1O88704 Gm18284-201ENSMUST00000172604 624 ntBASIC17.99■□□□□ 0.47
Hcn1O88704 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hcn1O88704 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.99■□□□□ 0.47
Hcn1O88704 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Hcn1O88704 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.99■□□□□ 0.47
Hcn1O88704 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcn1O88704 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hcn1O88704 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.99■□□□□ 0.47
Hcn1O88704 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.98■□□□□ 0.47
Hcn1O88704 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.98■□□□□ 0.47
Hcn1O88704 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hcn1O88704 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.98■□□□□ 0.47
Hcn1O88704 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hcn1O88704 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcn1O88704 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hcn1O88704 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hcn1O88704 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hcn1O88704 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hcn1O88704 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Hcn1O88704 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.97■□□□□ 0.47
Hcn1O88704 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hcn1O88704 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcn1O88704 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.97■□□□□ 0.47
Hcn1O88704 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Hcn1O88704 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.96■□□□□ 0.47
Hcn1O88704 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.96■□□□□ 0.47
Hcn1O88704 AA386476-201ENSMUST00000098781 1665 ntBASIC17.96■□□□□ 0.47
Hcn1O88704 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcn1O88704 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hcn1O88704 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms