Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20bO88575 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.75■□□□□ 0.91
Slc6a20bO88575 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Gm43799-201ENSMUST00000201845 579 ntBASIC20.74■□□□□ 0.91
Slc6a20bO88575 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20bO88575 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.73■□□□□ 0.91
Slc6a20bO88575 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20bO88575 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc6a20bO88575 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Slc6a20bO88575 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Gm5417-201ENSMUST00000079706 384 ntBASIC20.72■□□□□ 0.91
Slc6a20bO88575 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20bO88575 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc6a20bO88575 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.71■□□□□ 0.91
Slc6a20bO88575 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Slc6a20bO88575 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Slc6a20bO88575 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20bO88575 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Gm10819-201ENSMUST00000099988 561 ntBASIC20.69■□□□□ 0.9
Slc6a20bO88575 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20bO88575 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20bO88575 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc6a20bO88575 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20bO88575 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20bO88575 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.67■□□□□ 0.9
Slc6a20bO88575 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20bO88575 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20bO88575 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms