Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3aO88508 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3aO88508 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Golph3-205ENSMUST00000228671 2842 ntBASIC18.91■□□□□ 0.62
Dnmt3aO88508 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Dnmt3aO88508 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Dnmt3aO88508 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Dnmt3aO88508 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Dnmt3aO88508 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Gm10033-202ENSMUST00000211874 928 ntBASIC18.89■□□□□ 0.61
Dnmt3aO88508 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.89■□□□□ 0.61
Dnmt3aO88508 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dnmt3aO88508 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Dnmt3aO88508 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Gm26571-201ENSMUST00000181399 666 ntBASIC18.86■□□□□ 0.61
Dnmt3aO88508 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Dnmt3aO88508 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Dnmt3aO88508 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Gm42569-201ENSMUST00000200539 472 ntBASIC18.84■□□□□ 0.61
Dnmt3aO88508 AV356131-201ENSMUST00000206201 750 ntBASIC18.84■□□□□ 0.61
Dnmt3aO88508 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Rarb-207ENSMUST00000225921 2756 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms