Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1hO88427 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1hO88427 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.54■□□□□ 0.56
Cacna1hO88427 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1hO88427 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Cacna1hO88427 Gm18025-201ENSMUST00000221733 862 ntBASIC18.53■□□□□ 0.56
Cacna1hO88427 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cacna1hO88427 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cacna1hO88427 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.53■□□□□ 0.56
Cacna1hO88427 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Gm28033-201ENSMUST00000184224 96 ntBASIC18.53■□□□□ 0.56
Cacna1hO88427 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1hO88427 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.53■□□□□ 0.56
Cacna1hO88427 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.53■□□□□ 0.56
Cacna1hO88427 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 AA386476-201ENSMUST00000098781 1665 ntBASIC18.52■□□□□ 0.56
Cacna1hO88427 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Gm12382-201ENSMUST00000122005 922 ntBASIC18.52■□□□□ 0.56
Cacna1hO88427 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1hO88427 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Gm45058-201ENSMUST00000205810 766 ntBASIC18.52■□□□□ 0.55
Cacna1hO88427 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.52■□□□□ 0.55
Cacna1hO88427 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1hO88427 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cacna1hO88427 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cacna1hO88427 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
Cacna1hO88427 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1hO88427 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cacna1hO88427 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.5■□□□□ 0.55
Cacna1hO88427 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.5■□□□□ 0.55
Cacna1hO88427 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1hO88427 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.49■□□□□ 0.55
Cacna1hO88427 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.49■□□□□ 0.55
Cacna1hO88427 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1hO88427 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1hO88427 Gm43183-201ENSMUST00000200632 547 ntBASIC18.48■□□□□ 0.55
Cacna1hO88427 Gm18959-201ENSMUST00000208954 655 ntBASIC18.48■□□□□ 0.55
Cacna1hO88427 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1hO88427 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1hO88427 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1hO88427 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1hO88427 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Cacna1hO88427 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Gm25016-201ENSMUST00000158399 131 ntBASIC18.47■□□□□ 0.55
Cacna1hO88427 Gm3375-201ENSMUST00000203929 796 ntBASIC18.47■□□□□ 0.55
Cacna1hO88427 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cacna1hO88427 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1hO88427 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms