Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Gm9870-201ENSMUST00000063874 645 ntBASIC18.49■□□□□ 0.55
Cdh16O88338 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdh16O88338 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh16O88338 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh16O88338 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdh16O88338 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh16O88338 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdh16O88338 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.48■□□□□ 0.55
Cdh16O88338 Mir6236-201ENSMUST00000184437 123 ntBASIC18.48■□□□□ 0.55
Cdh16O88338 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdh16O88338 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdh16O88338 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh16O88338 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdh16O88338 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Cdh16O88338 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdh16O88338 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh16O88338 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cdh16O88338 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.46■□□□□ 0.55
Cdh16O88338 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.46■□□□□ 0.55
Cdh16O88338 Gm9959-201ENSMUST00000068277 390 ntBASIC18.46■□□□□ 0.55
Cdh16O88338 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh16O88338 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Cdh16O88338 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdh16O88338 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.45■□□□□ 0.54
Cdh16O88338 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdh16O88338 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Cdh16O88338 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.45■□□□□ 0.54
Cdh16O88338 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Fst-202ENSMUST00000223640 2612 ntBASIC18.45■□□□□ 0.54
Cdh16O88338 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cdh16O88338 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh16O88338 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cdh16O88338 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdh16O88338 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Cdh16O88338 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cdh16O88338 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh16O88338 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdh16O88338 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdh16O88338 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdh16O88338 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh16O88338 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
Cdh16O88338 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms