Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.87■□□□□ 0.45
Rdh5O55240 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rdh5O55240 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Rdh5O55240 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh5O55240 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh5O55240 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.87■□□□□ 0.45
Rdh5O55240 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh5O55240 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh5O55240 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh5O55240 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh5O55240 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
Rdh5O55240 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh5O55240 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.86■□□□□ 0.45
Rdh5O55240 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.86■□□□□ 0.45
Rdh5O55240 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Rdh5O55240 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh5O55240 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh5O55240 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rdh5O55240 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rdh5O55240 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rdh5O55240 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.85■□□□□ 0.45
Rdh5O55240 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
Rdh5O55240 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rdh5O55240 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh5O55240 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rdh5O55240 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rdh5O55240 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rdh5O55240 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.84■□□□□ 0.45
Rdh5O55240 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rdh5O55240 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.84■□□□□ 0.45
Rdh5O55240 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Gm10493-201ENSMUST00000097270 612 ntBASIC17.84■□□□□ 0.45
Rdh5O55240 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rdh5O55240 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rdh5O55240 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh5O55240 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rdh5O55240 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh5O55240 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Rdh5O55240 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rdh5O55240 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.83■□□□□ 0.44
Rdh5O55240 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.83■□□□□ 0.44
Rdh5O55240 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh5O55240 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.82■□□□□ 0.44
Rdh5O55240 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.82■□□□□ 0.44
Rdh5O55240 Gm38205-201ENSMUST00000192243 258 ntBASIC17.82■□□□□ 0.44
Rdh5O55240 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh5O55240 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.82■□□□□ 0.44
Rdh5O55240 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rdh5O55240 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rdh5O55240 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.81■□□□□ 0.44
Rdh5O55240 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms