Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ldb2O55203 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb2O55203 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.81■□□□□ 0.6
Ldb2O55203 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
Ldb2O55203 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Gm13146-201ENSMUST00000118508 780 ntBASIC18.81■□□□□ 0.6
Ldb2O55203 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ldb2O55203 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ldb2O55203 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ldb2O55203 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ldb2O55203 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ldb2O55203 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb2O55203 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ldb2O55203 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ldb2O55203 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb2O55203 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb2O55203 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb2O55203 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ldb2O55203 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ldb2O55203 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.79■□□□□ 0.6
Ldb2O55203 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ldb2O55203 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.79■□□□□ 0.6
Ldb2O55203 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ldb2O55203 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Ldb2O55203 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ldb2O55203 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.78■□□□□ 0.6
Ldb2O55203 Gm13234-201ENSMUST00000120010 747 ntBASIC18.78■□□□□ 0.6
Ldb2O55203 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.78■□□□□ 0.6
Ldb2O55203 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ldb2O55203 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Ldb2O55203 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.78■□□□□ 0.6
Ldb2O55203 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
Ldb2O55203 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ldb2O55203 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.77■□□□□ 0.6
Ldb2O55203 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb2O55203 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb2O55203 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb2O55203 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.77■□□□□ 0.6
Ldb2O55203 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.77■□□□□ 0.6
Ldb2O55203 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.77■□□□□ 0.6
Ldb2O55203 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb2O55203 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ldb2O55203 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ldb2O55203 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ldb2O55203 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.76■□□□□ 0.59
Ldb2O55203 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ldb2O55203 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ldb2O55203 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ldb2O55203 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Ldb2O55203 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ldb2O55203 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ldb2O55203 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms