Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl35aO55142 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpl35aO55142 AV356131-201ENSMUST00000206201 750 ntBASIC14.05□□□□□ -0.16
Rpl35aO55142 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpl35aO55142 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.05□□□□□ -0.16
Rpl35aO55142 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpl35aO55142 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl35aO55142 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpl35aO55142 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.04□□□□□ -0.16
Rpl35aO55142 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rpl35aO55142 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Gm38205-201ENSMUST00000192243 258 ntBASIC14.04□□□□□ -0.16
Rpl35aO55142 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Gm10033-202ENSMUST00000211874 928 ntBASIC14.04□□□□□ -0.16
Rpl35aO55142 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.04□□□□□ -0.16
Rpl35aO55142 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpl35aO55142 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpl35aO55142 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl35aO55142 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpl35aO55142 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.03□□□□□ -0.16
Rpl35aO55142 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.03□□□□□ -0.16
Rpl35aO55142 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpl35aO55142 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl35aO55142 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl35aO55142 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl35aO55142 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl35aO55142 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl35aO55142 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpl35aO55142 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rpl35aO55142 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl35aO55142 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rpl35aO55142 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rpl35aO55142 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rpl35aO55142 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl35aO55142 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl35aO55142 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.01□□□□□ -0.17
Rpl35aO55142 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl35aO55142 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpl35aO55142 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms