Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pde6dO55057 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pde6dO55057 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pde6dO55057 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Gm7332-201ENSMUST00000118351 454 ntBASIC14.93□□□□□ -0.02
Pde6dO55057 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
Pde6dO55057 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pde6dO55057 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pde6dO55057 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.93□□□□□ -0.02
Pde6dO55057 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.92□□□□□ -0.02
Pde6dO55057 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.92□□□□□ -0.02
Pde6dO55057 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.92□□□□□ -0.02
Pde6dO55057 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pde6dO55057 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.91□□□□□ -0.02
Pde6dO55057 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pde6dO55057 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pde6dO55057 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pde6dO55057 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.9□□□□□ -0.02
Pde6dO55057 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.9□□□□□ -0.02
Pde6dO55057 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pde6dO55057 Gm10399-202ENSMUST00000202768 748 ntBASIC14.9□□□□□ -0.02
Pde6dO55057 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.9□□□□□ -0.02
Pde6dO55057 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.9□□□□□ -0.02
Pde6dO55057 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pde6dO55057 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.89□□□□□ -0.03
Pde6dO55057 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.89□□□□□ -0.03
Pde6dO55057 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pde6dO55057 Gm27502-201ENSMUST00000183495 199 ntBASIC14.89□□□□□ -0.03
Pde6dO55057 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pde6dO55057 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pde6dO55057 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pde6dO55057 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.89□□□□□ -0.03
Pde6dO55057 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.89□□□□□ -0.03
Pde6dO55057 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pde6dO55057 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.88□□□□□ -0.03
Pde6dO55057 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.88□□□□□ -0.03
Pde6dO55057 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pde6dO55057 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pde6dO55057 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pde6dO55057 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6dO55057 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms