Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.18■□□□□ 0.66
Limk2O54785 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Limk2O54785 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk2O54785 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
Limk2O54785 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Limk2O54785 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Limk2O54785 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.17■□□□□ 0.66
Limk2O54785 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.17■□□□□ 0.66
Limk2O54785 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Limk2O54785 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Limk2O54785 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk2O54785 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.16■□□□□ 0.66
Limk2O54785 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Limk2O54785 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Limk2O54785 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.16■□□□□ 0.66
Limk2O54785 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.16■□□□□ 0.66
Limk2O54785 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.16■□□□□ 0.66
Limk2O54785 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk2O54785 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
Limk2O54785 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Limk2O54785 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.15■□□□□ 0.66
Limk2O54785 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.15■□□□□ 0.66
Limk2O54785 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk2O54785 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Limk2O54785 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Limk2O54785 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Limk2O54785 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Limk2O54785 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Gm13146-201ENSMUST00000118508 780 ntBASIC19.14■□□□□ 0.65
Limk2O54785 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Gm7514-201ENSMUST00000209475 934 ntBASIC19.14■□□□□ 0.65
Limk2O54785 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Limk2O54785 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk2O54785 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Limk2O54785 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk2O54785 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk2O54785 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk2O54785 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Limk2O54785 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk2O54785 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk2O54785 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Limk2O54785 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Limk2O54785 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.12■□□□□ 0.65
Limk2O54785 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.12■□□□□ 0.65
Limk2O54785 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk2O54785 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk2O54785 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.11■□□□□ 0.65
Limk2O54785 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms