Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scamp3O35609 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scamp3O35609 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scamp3O35609 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Scamp3O35609 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.75■□□□□ 0.59
Scamp3O35609 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scamp3O35609 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Scamp3O35609 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scamp3O35609 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.75■□□□□ 0.59
Scamp3O35609 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scamp3O35609 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scamp3O35609 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scamp3O35609 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scamp3O35609 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.74■□□□□ 0.59
Scamp3O35609 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.74■□□□□ 0.59
Scamp3O35609 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scamp3O35609 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scamp3O35609 Nespas-201ENSMUST00000143738 1083 ntBASIC18.73■□□□□ 0.59
Scamp3O35609 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Scamp3O35609 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.73■□□□□ 0.59
Scamp3O35609 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.72■□□□□ 0.59
Scamp3O35609 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.72■□□□□ 0.59
Scamp3O35609 Gm6420-201ENSMUST00000193885 723 ntBASIC18.72■□□□□ 0.59
Scamp3O35609 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scamp3O35609 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Scamp3O35609 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.72■□□□□ 0.59
Scamp3O35609 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Scamp3O35609 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scamp3O35609 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scamp3O35609 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scamp3O35609 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.71■□□□□ 0.59
Scamp3O35609 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.71■□□□□ 0.59
Scamp3O35609 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.71■□□□□ 0.59
Scamp3O35609 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scamp3O35609 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scamp3O35609 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scamp3O35609 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Scamp3O35609 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scamp3O35609 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Scamp3O35609 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scamp3O35609 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scamp3O35609 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scamp3O35609 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Scamp3O35609 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scamp3O35609 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.69■□□□□ 0.58
Scamp3O35609 Gm13146-201ENSMUST00000118508 780 ntBASIC18.69■□□□□ 0.58
Scamp3O35609 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scamp3O35609 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scamp3O35609 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Scamp3O35609 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scamp3O35609 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.69■□□□□ 0.58
Scamp3O35609 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scamp3O35609 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scamp3O35609 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scamp3O35609 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scamp3O35609 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.68■□□□□ 0.58
Scamp3O35609 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scamp3O35609 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scamp3O35609 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms