Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Efnb3O35393 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Efnb3O35393 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Efnb3O35393 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Efnb3O35393 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Efnb3O35393 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Efnb3O35393 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
Efnb3O35393 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Efnb3O35393 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Efnb3O35393 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Efnb3O35393 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Efnb3O35393 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.89□□□□□ -0.03
Efnb3O35393 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.89□□□□□ -0.03
Efnb3O35393 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.89□□□□□ -0.03
Efnb3O35393 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.89□□□□□ -0.03
Efnb3O35393 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Efnb3O35393 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Efnb3O35393 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Efnb3O35393 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Efnb3O35393 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Efnb3O35393 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.88□□□□□ -0.03
Efnb3O35393 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Efnb3O35393 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.87□□□□□ -0.03
Efnb3O35393 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Efnb3O35393 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Efnb3O35393 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.87□□□□□ -0.03
Efnb3O35393 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Efnb3O35393 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Efnb3O35393 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.86□□□□□ -0.03
Efnb3O35393 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Efnb3O35393 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.86□□□□□ -0.03
Efnb3O35393 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms