Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Capn1O35350 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.41■□□□□ 0.38
Capn1O35350 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.41■□□□□ 0.38
Capn1O35350 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Capn1O35350 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Capn1O35350 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Capn1O35350 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Capn1O35350 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Capn1O35350 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Capn1O35350 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Capn1O35350 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Capn1O35350 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Capn1O35350 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Capn1O35350 Gm13146-201ENSMUST00000118508 780 ntBASIC17.4■□□□□ 0.38
Capn1O35350 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.4■□□□□ 0.38
Capn1O35350 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Capn1O35350 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn1O35350 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.38
Capn1O35350 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Capn1O35350 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Capn1O35350 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
Capn1O35350 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.39■□□□□ 0.37
Capn1O35350 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn1O35350 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Capn1O35350 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.38■□□□□ 0.37
Capn1O35350 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.38■□□□□ 0.37
Capn1O35350 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Capn1O35350 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.38■□□□□ 0.37
Capn1O35350 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.38■□□□□ 0.37
Capn1O35350 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.38■□□□□ 0.37
Capn1O35350 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Capn1O35350 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Capn1O35350 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Capn1O35350 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.37■□□□□ 0.37
Capn1O35350 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.37■□□□□ 0.37
Capn1O35350 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Capn1O35350 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn1O35350 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Capn1O35350 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.36■□□□□ 0.37
Capn1O35350 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Capn1O35350 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Capn1O35350 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.36■□□□□ 0.37
Capn1O35350 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn1O35350 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Capn1O35350 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Capn1O35350 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Capn1O35350 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms