Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11aO35305 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tnfrsf11aO35305 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11aO35305 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.39■□□□□ 0.86
Tnfrsf11aO35305 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11aO35305 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11aO35305 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11aO35305 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Gm10849-201ENSMUST00000100397 618 ntBASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Gm13534-201ENSMUST00000121169 513 ntBASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11aO35305 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf11aO35305 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf11aO35305 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms