Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11bO08712 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnfrsf11bO08712 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11bO08712 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Gm6139-201ENSMUST00000079261 882 ntBASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11bO08712 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11bO08712 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfrsf11bO08712 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfrsf11bO08712 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfrsf11bO08712 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf11bO08712 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf11bO08712 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Gm45417-201ENSMUST00000209533 758 ntBASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf11bO08712 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf11bO08712 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf11bO08712 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf11bO08712 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf11bO08712 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf11bO08712 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms