Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Gm37856-201ENSMUST00000191634 999 ntBASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Trim34bJ3QNR8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim34bJ3QNR8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim34bJ3QNR8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Trmt13-210ENSMUST00000198454 880 ntBASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.15■■□□□ 1.3
Trim34bJ3QNR8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim34bJ3QNR8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Trim34bJ3QNR8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim34bJ3QNR8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim34bJ3QNR8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim34bJ3QNR8 Gm13168-201ENSMUST00000121771 632 ntBASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim34bJ3QNR8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim34bJ3QNR8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim34bJ3QNR8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim34bJ3QNR8 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms