Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.1■□□□□ 0.81
Gm3415J3QMS8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3415J3QMS8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3415J3QMS8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3415J3QMS8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3415J3QMS8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3415J3QMS8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3415J3QMS8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3415J3QMS8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3415J3QMS8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Gm10033-202ENSMUST00000211874 928 ntBASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gm3415J3QMS8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Gm42569-201ENSMUST00000200539 472 ntBASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Gm3415J3QMS8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3415J3QMS8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3415J3QMS8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm3415J3QMS8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Gm3415J3QMS8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3415J3QMS8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms