Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim55G3X8Y1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim55G3X8Y1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim55G3X8Y1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim55G3X8Y1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.33■□□□□ 0.69
Trim55G3X8Y1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim55G3X8Y1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim55G3X8Y1 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim55G3X8Y1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim55G3X8Y1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms