Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Gm11421-201ENSMUST00000122124 294 ntBASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh9F8VPK8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh9F8VPK8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh9F8VPK8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh9F8VPK8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh9F8VPK8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh9F8VPK8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh9F8VPK8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh9F8VPK8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Gm43173-201ENSMUST00000202246 593 ntBASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh9F8VPK8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdh9F8VPK8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh9F8VPK8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh9F8VPK8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh9F8VPK8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh9F8VPK8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Gm27801-201ENSMUST00000184174 223 ntBASIC19.29■□□□□ 0.68
Pcdh9F8VPK8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms