Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4aE9Q735 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4aE9Q735 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Dio3-201ENSMUST00000097228 1449 ntBASIC22.85■■□□□ 1.25
Ube4aE9Q735 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.85■■□□□ 1.25
Ube4aE9Q735 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Gm44549-201ENSMUST00000208351 577 ntBASIC22.85■■□□□ 1.25
Ube4aE9Q735 Gm10252-201ENSMUST00000209541 832 ntBASIC22.85■■□□□ 1.25
Ube4aE9Q735 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4aE9Q735 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.84■■□□□ 1.25
Ube4aE9Q735 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ube4aE9Q735 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ube4aE9Q735 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ube4aE9Q735 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.83■■□□□ 1.25
Ube4aE9Q735 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.83■■□□□ 1.25
Ube4aE9Q735 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.83■■□□□ 1.25
Ube4aE9Q735 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.24
Ube4aE9Q735 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Ube4aE9Q735 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Gm10812-201ENSMUST00000099864 546 ntBASIC22.82■■□□□ 1.24
Ube4aE9Q735 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.82■■□□□ 1.24
Ube4aE9Q735 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4aE9Q735 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4aE9Q735 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ube4aE9Q735 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4aE9Q735 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Gm5643-201ENSMUST00000117081 966 ntBASIC22.78■■□□□ 1.24
Ube4aE9Q735 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4aE9Q735 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Ube4aE9Q735 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms